Long-read genome sequencing of Perkinsus marinus strain Levine (ATCC ... - SRA

SRX15488165: Long-read genome sequencing of Perkinsus marinus strain Levine (ATCC 50983)
1 PACBIO_SMRT (PacBio RS II) run: 69,623 spots, 607.8M bases, 396.1Mb downloads

Design: High molecular weight genomic DNA of P. marinus was extracted using the Qiagen genomic tip kit for high molecular weight DNA, following the manufacturers instructions. Nucleic acid integrity control was performed using a Fragment Analyzer (Advanced Analytical Technologies). The extracted genomic DNA was quantified with a Qubit 2.0 Fluorometer and was used for the preparation of SMRTbell Libraries

Submitted by: University of Cambridge

Study: Mitochondrial genomes in Perkinsus decode conserved frameshifts in all genes

PRJNA811585 • SRP377358 • All experiments • All runs

show Abstracthide Abstract

Four Perkinsus species mitochondrial genomes were sequenced to determine ancestral myzozoan mitochondrial genome features, as well as any novel ones in Perkinsozoa. Among the unusual features of Perkinsus species, we determined the coding capacity and remarkable use of frameshifts in yet another form of divergent myzozoan mtDNAs

Sample: Perkinsus marinus strain Levine (ATCC 50983)

SAMN26343886 • SRS13198051 • All experiments • All runs

Organism: Perkinsus marinus

Library:

Name: Pmar_065709_02

Instrument: PacBio RS II

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 69,623 spots, 607.8M bases, 396.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR19434920	69,623	607.8M	396.1Mb	2022-05-28

ID:: 22061982

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity